Prognosis Individualized: Survival predictions for WHO grade II and III gliomas with a machine learning-based web application
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Author
Karabacak, MertJagtiani, Pemla
Carrasquilla, Alejandro
Germano, Isabelle M.
Margetis, Konstantinos
Keyword
Health Information ManagementHealth Informatics
Computer Science Applications
Medicine (miscellaneous)
Journal title
npj Digital MedicineDate Published
2023-10-26Publication Volume
6Publication Issue
1
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Show full item recordAbstract
WHO grade II and III gliomas demonstrate diverse biological behaviors resulting in variable survival outcomes. In the context of glioma prognosis, machine learning (ML) approaches could facilitate the navigation through the maze of factors influencing survival, aiding clinicians in generating more precise and personalized survival predictions. Here we report the utilization of ML models in predicting survival at 12, 24, 36, and 60 months following grade II and III glioma diagnosis. From the National Cancer Database, we analyze 10,001 WHO grade II and 11,456 grade III cranial gliomas. Using the area under the receiver operating characteristic (AUROC) values, we deploy the top-performing models in a web application for individualized predictions. SHapley Additive exPlanations (SHAP) enhance the interpretability of the models. Top-performing predictive models are the ones built with LightGBM and Random Forest algorithms. For grade II gliomas, the models yield AUROC values ranging from 0.813 to 0.896 for predicting mortality across different timeframes, and for grade III gliomas, the models yield AUROCs ranging from 0.855 to 0.878. ML models provide individualized survival forecasts for grade II and III glioma patients across multiple clinically relevant time points. The user-friendly web application represents a pioneering digital tool to potentially integrate predictive analytics into neuro-oncology clinical practice, to empower prognostication and personalize clinical decision-making.Citation
Karabacak M, Jagtiani P, Carrasquilla A, Germano IM, Margetis K. Prognosis Individualized: Survival predictions for WHO grade II and III gliomas with a machine learning-based web application. NPJ Digit Med. 2023 Oct 26;6(1):200. doi: 10.1038/s41746-023-00948-y. PMID: 37884599; PMCID: PMC10603035.DOI
10.1038/s41746-023-00948-yae974a485f413a2113503eed53cd6c53
10.1038/s41746-023-00948-y
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Except where otherwise noted, this item's license is described as https://creativecommons.org/licenses/by/4.0
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